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bcbio.align.cram

Manipulate CRAM files

Manipulate CRAM files
raw docstring

do-indexclj

(do-index cram-file)

Perform indexing of a CRAM file inside a temporary directory

Perform indexing of a CRAM file inside a temporary directory
sourceraw docstring

sample-namesclj

(sample-names cram-file ref-file)

Identify sample names via conversion of CRAM to BAM to get the header

Identify sample names via conversion of CRAM to BAM to get the header
sourceraw docstring

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