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bcbio.variation.recall.vcfheader

Create VCF headers using algorithms contained in Picard/Tribble tools. This does the best job of cleanly merging and organizing headers from multiple variant calling approaches.

Create VCF headers using algorithms contained in Picard/Tribble tools.
This does the best job of cleanly merging and organizing headers from
multiple variant calling approaches.
raw docstring

merge-from-filesclj

(merge-from-files orig-files ref-file out-file)

Creates a merged VCF header from the supplied input VCFs.

Creates a merged VCF header from the supplied input VCFs.
sourceraw docstring

with-mergedcljmacro

(with-merged [header-file orig-files ref-file out-file] & body)

Create a merged VCF header file from input VCFs, deleted on completion.

Create a merged VCF header file from input VCFs, deleted on completion.
sourceraw docstring

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