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clj-biosequence.entrezgene


->entrezBiosourceclj

(->entrezBiosource src)

Positional factory function for class clj_biosequence.entrezgene.entrezBiosource.

Positional factory function for class clj_biosequence.entrezgene.entrezBiosource.
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->entrezDbTagclj

(->entrezDbTag src)

Positional factory function for class clj_biosequence.entrezgene.entrezDbTag.

Positional factory function for class clj_biosequence.entrezgene.entrezDbTag.
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->entrezExtraTermclj

(->entrezExtraTerm src)

Positional factory function for class clj_biosequence.entrezgene.entrezExtraTerm.

Positional factory function for class clj_biosequence.entrezgene.entrezExtraTerm.
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->entrezGeneclj

(->entrezGene src)

Positional factory function for class clj_biosequence.entrezgene.entrezGene.

Positional factory function for class clj_biosequence.entrezgene.entrezGene.
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->entrezGeneCommentclj

(->entrezGeneComment src)

Positional factory function for class clj_biosequence.entrezgene.entrezGeneComment.

Positional factory function for class clj_biosequence.entrezgene.entrezGeneComment.
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->entrezGeneConnectionclj

(->entrezGeneConnection acc-list)

Positional factory function for class clj_biosequence.entrezgene.entrezGeneConnection.

Positional factory function for class clj_biosequence.entrezgene.entrezGeneConnection.
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->entrezgeneFileclj

(->entrezgeneFile file encoding)

Positional factory function for class clj_biosequence.entrezgene.entrezgeneFile.

Positional factory function for class clj_biosequence.entrezgene.entrezgeneFile.
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->entrezGeneReaderclj

(->entrezGeneReader strm)

Positional factory function for class clj_biosequence.entrezgene.entrezGeneReader.

Positional factory function for class clj_biosequence.entrezgene.entrezGeneReader.
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->entrezGeneSourceclj

(->entrezGeneSource src)

Positional factory function for class clj_biosequence.entrezgene.entrezGeneSource.

Positional factory function for class clj_biosequence.entrezgene.entrezGeneSource.
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->entrezGeneTrackclj

(->entrezGeneTrack src)

Positional factory function for class clj_biosequence.entrezgene.entrezGeneTrack.

Positional factory function for class clj_biosequence.entrezgene.entrezGeneTrack.
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->entrezIntervalclj

(->entrezInterval src)

Positional factory function for class clj_biosequence.entrezgene.entrezInterval.

Positional factory function for class clj_biosequence.entrezgene.entrezInterval.
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->entrezMapclj

(->entrezMap src)

Positional factory function for class clj_biosequence.entrezgene.entrezMap.

Positional factory function for class clj_biosequence.entrezgene.entrezMap.
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->entrezOrgNameclj

(->entrezOrgName src)

Positional factory function for class clj_biosequence.entrezgene.entrezOrgName.

Positional factory function for class clj_biosequence.entrezgene.entrezOrgName.
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->entrezOrgRefclj

(->entrezOrgRef src)

Positional factory function for class clj_biosequence.entrezgene.entrezOrgRef.

Positional factory function for class clj_biosequence.entrezgene.entrezOrgRef.
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->entrezOtherSourceclj

(->entrezOtherSource src)

Positional factory function for class clj_biosequence.entrezgene.entrezOtherSource.

Positional factory function for class clj_biosequence.entrezgene.entrezOtherSource.
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->entrezPcrPrimersclj

(->entrezPcrPrimers src)

Positional factory function for class clj_biosequence.entrezgene.entrezPcrPrimers.

Positional factory function for class clj_biosequence.entrezgene.entrezPcrPrimers.
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->entrezProteinclj

(->entrezProtein src)

Positional factory function for class clj_biosequence.entrezgene.entrezProtein.

Positional factory function for class clj_biosequence.entrezgene.entrezProtein.
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->entrezSeqLocationclj

(->entrezSeqLocation src)

Positional factory function for class clj_biosequence.entrezgene.entrezSeqLocation.

Positional factory function for class clj_biosequence.entrezgene.entrezSeqLocation.
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->entrezSubSourceclj

(->entrezSubSource src)

Positional factory function for class clj_biosequence.entrezgene.entrezSubSource.

Positional factory function for class clj_biosequence.entrezgene.entrezSubSource.
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default-entrez-commentsclj

source

display-stringclj

(display-string entrezmap)

Returns list of display strings from an entrezMap.

Returns list of display strings from an entrezMap.
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entrez-biosourceclj

(entrez-biosource entrezgene)

Returns a entrezgeneBiosource from an entrezgene.

Returns a entrezgeneBiosource from an entrezgene.
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entrez-gene-sourceclj

(entrez-gene-source entrezgene)

Returns a gene source record from an entrezgene.

Returns a gene source record from an entrezgene.
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entrez-gene-trackclj

(entrez-gene-track entrezgene)

Returns an entrezGeneTrack record from a entrezgene.

Returns an entrezGeneTrack record from a entrezgene.
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entrez-locationclj

(entrez-location entrezgene)

Returns a list of location maps from an entrezgene

Returns a list of location maps from an entrezgene
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entrez-non-unique-keysclj

(entrez-non-unique-keys entrezgene)

Returns a list of entrezDbtags representing non-unique keys.

Returns a list of entrezDbtags representing non-unique keys.
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entrez-unique-keysclj

(entrez-unique-keys entrezgene)

Returns a list of entrezDbtags representing unique keys.

Returns a list of entrezDbtags representing unique keys.
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entrezCommentscljprotocol

entrez-commentsclj

(entrez-comments this)

Returns entrezComment record.

Returns entrezComment record.

homology-commentsclj

(homology-comments this)

Returns homology entrezComment records.

Returns homology entrezComment records.

locus-commentsclj

(locus-comments this)

Returns locus entrezComment records.

Returns locus entrezComment records.

product-commentsclj

(product-comments this)

Returns product entrezComment records.

Returns product entrezComment records.

property-commentsclj

(property-comments this)

Returns property entrezComment records.

Returns property entrezComment records.

ref-gene-commentsclj

(ref-gene-comments this)

Returns ref-gene entrezComment records.

Returns ref-gene entrezComment records.
source

genomeclj

(genome biosource)

Returns a vector of the value and integer code for the genome from an entrezBiosource.

Returns a vector of the value and integer code for the genome from
an entrezBiosource.
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init-entrezgene-connectionclj

(init-entrezgene-connection acc-list)
source

init-entrezgene-fileclj

(init-entrezgene-file file & {:keys [encoding] :or {encoding "UTF-8"}})
source

init-gene-readerclj

(init-gene-reader strm)
source

map->entrezBiosourceclj

(map->entrezBiosource m__7585__auto__)

Factory function for class clj_biosequence.entrezgene.entrezBiosource, taking a map of keywords to field values.

Factory function for class clj_biosequence.entrezgene.entrezBiosource, taking a map of keywords to field values.
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map->entrezDbTagclj

(map->entrezDbTag m__7585__auto__)

Factory function for class clj_biosequence.entrezgene.entrezDbTag, taking a map of keywords to field values.

Factory function for class clj_biosequence.entrezgene.entrezDbTag, taking a map of keywords to field values.
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map->entrezExtraTermclj

(map->entrezExtraTerm m__7585__auto__)

Factory function for class clj_biosequence.entrezgene.entrezExtraTerm, taking a map of keywords to field values.

Factory function for class clj_biosequence.entrezgene.entrezExtraTerm, taking a map of keywords to field values.
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map->entrezGeneclj

(map->entrezGene m__7585__auto__)

Factory function for class clj_biosequence.entrezgene.entrezGene, taking a map of keywords to field values.

Factory function for class clj_biosequence.entrezgene.entrezGene, taking a map of keywords to field values.
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map->entrezGeneCommentclj

(map->entrezGeneComment m__7585__auto__)

Factory function for class clj_biosequence.entrezgene.entrezGeneComment, taking a map of keywords to field values.

Factory function for class clj_biosequence.entrezgene.entrezGeneComment, taking a map of keywords to field values.
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map->entrezGeneConnectionclj

(map->entrezGeneConnection m__7585__auto__)

Factory function for class clj_biosequence.entrezgene.entrezGeneConnection, taking a map of keywords to field values.

Factory function for class clj_biosequence.entrezgene.entrezGeneConnection, taking a map of keywords to field values.
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map->entrezgeneFileclj

(map->entrezgeneFile m__7585__auto__)

Factory function for class clj_biosequence.entrezgene.entrezgeneFile, taking a map of keywords to field values.

Factory function for class clj_biosequence.entrezgene.entrezgeneFile, taking a map of keywords to field values.
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map->entrezGeneReaderclj

(map->entrezGeneReader m__7585__auto__)

Factory function for class clj_biosequence.entrezgene.entrezGeneReader, taking a map of keywords to field values.

Factory function for class clj_biosequence.entrezgene.entrezGeneReader, taking a map of keywords to field values.
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map->entrezGeneSourceclj

(map->entrezGeneSource m__7585__auto__)

Factory function for class clj_biosequence.entrezgene.entrezGeneSource, taking a map of keywords to field values.

Factory function for class clj_biosequence.entrezgene.entrezGeneSource, taking a map of keywords to field values.
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map->entrezGeneTrackclj

(map->entrezGeneTrack m__7585__auto__)

Factory function for class clj_biosequence.entrezgene.entrezGeneTrack, taking a map of keywords to field values.

Factory function for class clj_biosequence.entrezgene.entrezGeneTrack, taking a map of keywords to field values.
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map->entrezIntervalclj

(map->entrezInterval m__7585__auto__)

Factory function for class clj_biosequence.entrezgene.entrezInterval, taking a map of keywords to field values.

Factory function for class clj_biosequence.entrezgene.entrezInterval, taking a map of keywords to field values.
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map->entrezMapclj

(map->entrezMap m__7585__auto__)

Factory function for class clj_biosequence.entrezgene.entrezMap, taking a map of keywords to field values.

Factory function for class clj_biosequence.entrezgene.entrezMap, taking a map of keywords to field values.
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map->entrezOrgNameclj

(map->entrezOrgName m__7585__auto__)

Factory function for class clj_biosequence.entrezgene.entrezOrgName, taking a map of keywords to field values.

Factory function for class clj_biosequence.entrezgene.entrezOrgName, taking a map of keywords to field values.
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map->entrezOrgRefclj

(map->entrezOrgRef m__7585__auto__)

Factory function for class clj_biosequence.entrezgene.entrezOrgRef, taking a map of keywords to field values.

Factory function for class clj_biosequence.entrezgene.entrezOrgRef, taking a map of keywords to field values.
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map->entrezOtherSourceclj

(map->entrezOtherSource m__7585__auto__)

Factory function for class clj_biosequence.entrezgene.entrezOtherSource, taking a map of keywords to field values.

Factory function for class clj_biosequence.entrezgene.entrezOtherSource, taking a map of keywords to field values.
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map->entrezPcrPrimersclj

(map->entrezPcrPrimers m__7585__auto__)

Factory function for class clj_biosequence.entrezgene.entrezPcrPrimers, taking a map of keywords to field values.

Factory function for class clj_biosequence.entrezgene.entrezPcrPrimers, taking a map of keywords to field values.
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map->entrezProteinclj

(map->entrezProtein m__7585__auto__)

Factory function for class clj_biosequence.entrezgene.entrezProtein, taking a map of keywords to field values.

Factory function for class clj_biosequence.entrezgene.entrezProtein, taking a map of keywords to field values.
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map->entrezSeqLocationclj

(map->entrezSeqLocation m__7585__auto__)

Factory function for class clj_biosequence.entrezgene.entrezSeqLocation, taking a map of keywords to field values.

Factory function for class clj_biosequence.entrezgene.entrezSeqLocation, taking a map of keywords to field values.
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map->entrezSubSourceclj

(map->entrezSubSource m__7585__auto__)

Factory function for class clj_biosequence.entrezgene.entrezSubSource, taking a map of keywords to field values.

Factory function for class clj_biosequence.entrezgene.entrezSubSource, taking a map of keywords to field values.
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map-method-typeclj

(map-method-type entrezmap)

Returns list of units used in display-str to query mapviewer from an entrezMap.

Returns list of units used in display-str to query mapviewer from
an entrezMap.
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map-proxyclj

(map-proxy entrezmap)

Returns list of urls to non mapviewer mapviewing resource from an entrezMap.

Returns list of urls to non mapviewer mapviewing resource from an
entrezMap.
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org-nameclj

(org-name org)

Returns a org-name record from an org ref.

Returns a org-name record from an org ref.
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org-refclj

(org-ref biosource)

Returns an org-ref from an entrezBiosource.

Returns an org-ref from an entrezBiosource.
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originclj

(origin biosource)

Returns a vector of the value and integer code for the origin from an entrezBiosource.

Returns a vector of the value and integer code for the origin from
an entrezBiosource.
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other-sourcesclj

(other-sources comment)

Returns a list of other entrezOtherSource records from an entrezGeneComment.

Returns a list of other entrezOtherSource records from an
entrezGeneComment.
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pcr-primersclj

(pcr-primers biosource)

Returns a pcr primers record from an entrezBiosource.

Returns a pcr primers record from an entrezBiosource.
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pmidsclj

(pmids comment)

Returns a list of pubmed ids from an entrezGeneComment.

Returns a list of pubmed ids from an entrezGeneComment.
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seq-locationsclj

(seq-locations comment)

Returns a list of entrezSeqLocation records from an entrezGeneComment.

Returns a list of entrezSeqLocation records from an
entrezGeneComment.
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source-idclj

(source-id genesource)
source

source-nameclj

(source-name genesource)
source

string1clj

(string1 genesource)

Returns the string1 entry from a entrezGeneSource.

Returns the string1 entry from a entrezGeneSource.
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string2clj

(string2 genesource)

Returns the string1 entry from a entrezGeneSource.

Returns the string1 entry from a entrezGeneSource.
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subsourceclj

(subsource biosource)

Returns a list of subsource records from an entrezBiosource.

Returns a list of subsource records from an entrezBiosource.
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subsource-attributeclj

(subsource-attribute sub)

Returns the attribute from a subsource.

Returns the attribute from a subsource.
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subsource-nameclj

(subsource-name sub)

Returns the name of a subsource.

Returns the name of a subsource.
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subsource-typeclj

(subsource-type sub)

Returns a vector of the value and integer code of the subtype of a subsource.

Returns a vector of the value and integer code of the subtype of a
subsource.
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walk-commentsclj

(walk-comments start & args)

Recursively steps through levels of comments. For each level a function and a value can be supplied to filter comments. A final argument can be supplied to extract a field from the final set of comments.

Recursively steps through levels of comments. For each level a
function and a value can be supplied to filter comments. A final
argument can be supplied to extract a field from the final set of
comments.
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xtra-termsclj

(xtra-terms comment)

Returns a list of vectors with the tag and value pairs from an Xtra-Terms in an entrezGeneComment.

Returns a list of vectors with the tag and value pairs from an
Xtra-Terms in an entrezGeneComment.
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