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cljam.io.fasta.core

clone-readerclj

(clone-reader rdr)

Clones fasta reader sharing persistent objects.

Clones fasta reader sharing persistent objects.
sourceraw docstring

readclj

(read rdr)
source

read-headersclj

(read-headers rdr)
source

read-indicesclj

(read-indices rdr)
source

read-seq-summariesclj

(read-seq-summaries rdr)

Read summaries of sequences in this FASTA file.

Read summaries of sequences in this FASTA file.
sourceraw docstring

read-sequenceclj

(read-sequence rdr {:keys [chr start end]} opts)
source

read-sequencesclj

(read-sequences rdr)

Reads sequences by line, returning the line-separated sequences as lazy sequence.

Reads sequences by line, returning the line-separated sequences
as lazy sequence.
sourceraw docstring

readerclj

(reader f)
source

resetclj

(reset rdr)
source

sequential-readclj

(sequential-read rdr)
(sequential-read rdr opts)
source

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