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clj-biosequence.alphabet


allowed-character?clj

(allowed-character? ala char)
source

alphabet-is-protein?clj

(alphabet-is-protein? ala)
source

alphabet?clj

(alphabet? k)
source

alphabetsclj

source

checked?clj

(checked? ala)
source

codon->aaclj

(codon->aa chars table)

Takes a seq of three chars representing nucleic acid residues and returns a char representing the encoded amino acid.

Takes a seq of three chars representing nucleic acid residues and
returns a char representing the encoded amino acid.
sourceraw docstring

codon-tablesclj

source

dataclj

(data ala char)
source

get-alphabetclj

(get-alphabet k)
source

iupacAminoAcidsclj

source

iupacNucleicAcidsclj

source

revcomclj

(revcom v)

Takes a seq of chars representing nucleic acids and returns a vector of the reverse complement.

Takes a seq of chars representing nucleic acids and returns a
vector of the reverse complement.
sourceraw docstring

signalpAminoAcidsclj

source

uncheckedDNAclj

source

uncheckedProteinclj

source

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