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cljam.io.cram.decode.record
build-cram-record-decoderclj
(build-cram-record-decoder seq-resolver
cram-header
compression-header
slice-header
ds-decoders
tag-decoders)Builds a CRAM record decoder.
Returns a function with no arguments that returns a map representing a decoded CRAM record upon each call.
Builds a CRAM record decoder. Returns a function with no arguments that returns a map representing a decoded CRAM record upon each call.
decode-slice-recordsclj
(decode-slice-records seq-resolver
qname-generator
cram-header
compression-header
slice-header
ds-decoders
tag-decoders)Decodes CRAM records in a slice all at once and returns them as a sequence of maps.
Decodes CRAM records in a slice all at once and returns them as a sequence of maps.
resolve-mate-recordsclj
(resolve-mate-records records)Resolves mate records in the same slice by updating their flags, tlen, etc.
Resolves mate records in the same slice by updating their flags, tlen, etc.
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